INHIBITION OF BACTERIAL ANTIVIRAL CRISPR-CAS SYSTEM

Melita Graužinytė1, Tomas Šinkūnas1

1 Department of Protein-Nucleic Acids Interactions, Institute of Biotechnology, Life Sciences Center, Vilnius University, Lithuania

[email protected]

The battle between bacteria and bacteriophages has led to the development of defense mechanisms such as the CRISPR-Cas system by bacteria. This system uses ribonucleoprotein complexes to detect and destroy the DNA of invading phages [1]. To counteract this defense, bacteriophages encode small repressors called anti-CRISPR (Acr) proteins. These Acr proteins interact with the effector complex, preventing either the recognition or hydrolysis of DNA [2]. CRISPR-Cas has become a valuable tool for genome editing, while Acr proteins have been used to regulate this tool in both prokaryotes and eukaryotes [3]. To date, more than 100 Acr families have been identified. However, the molecular mechanism is characterized only for a small fraction of these proteins [4].

Here, we analyse Acr proteins that inhibit the type I-F CRIPR-Cas system from Pseudomonas aeruginosa. We identified the Acr protein blocking the system in bacterial cells. Then, purified the protein and by employing biochemical methods we studied its interplay with the CRISPR-Cas components. Our findings provide insight into the molecular mechanism of this uncharacterized Acr protein.


[1] Liu, T. Y., & Doudna, J. A. (2020). Chemistry of Class 1 CRISPR-Cas effectors: Binding, editing, and regulation. Journal of Biological Chemistry, 295(42), 14473-14487.

[2] Bondy-Denomy, J., Pawluk, A., Maxwell, K. L., & Davidson, A. R. (2013). Bacteriophage genes that inactivate the CRISPR/Cas bacterial immune system. Nature, 493(7432), 429-432.

[3] Marino, N. D., Pinilla-Redondo, R., Csörgő, B., & Bondy-Denomy, J. (2020). Anti-CRISPR protein applications: natural brakes for CRISPR-Cas technologies. Nature Methods 2020 17:5, 17(5), 471-479.

[4] Jia, N., & Patel, D. J. (2021). Structure-based functional mechanisms and biotechnology applications of anti-CRISPR proteins. Nature Reviews Molecular Cell Biology 2021 22:8, 22(8), 563-579.